Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910121.1_cds_XP_016460218.1_53660
CDS Infomation

[gene=LOC107783715] [db_xref=GeneID:107783715] [protein=AAA-ATPase At3g28610-like] [protein_id=XP_016460218.1] [location=complement(70902..72401)] [gbkey=CDS]
Sequence

ATGGGAGCAATGTCTTTGACTGAATTAGGCTCTAAGCTAGCTGGATTGATGTTCATTTGG
GGCACAATTCAGCAATTCTTCCCCTATACACTCCGCAAACGCATCAAATCCTTTTGGCAG
AAATTTGAAAATTACTTCTACCCTTATGTTCAAATTACCATAGATGAATTCTCCAATGGT
AAAAGCAACGATATATACACTCAGGTCAACTCTTATTTGGGTACTAAGTCAATCAACAAA
GATGCTAAGTATCTCAAAGCTGAAAAGTCAAAGAACAGTAAGTCTTTTGCTGTTAGTTTA
GATGAAGGAGAAGAGATTATTGATCAATTCCTTGGAGCTAAACTCTCTTGGCGCTCTCAT
ATCGAAACATTCAATGAAAATTCTTCAGGACGTAATAATTCACGTCCAATTGAAAAGAAA
AGTTACACGATAACGTTCAATAAACGATATAAAGAAATGGTCATTGAAAAATACTTGAAG
CATGTAATGGAAGAAGGTAAGGCAATTGAGTTCAAGAATAGGAAACAAAAGATTTACACC
AATAATTGTAGTGAGGATTGGTATTGGTATGGTAAAGGTATGTGGAGGGACATTAATTTT
GAGCATCCTGCAACTTTTGATACTTTGGCTATGGATCCTAAGAAGAAGGAGGAAATAGTT
AGCGATCTCGTTGCTTTTAGCAAAGGGAAGGACTATTATTCCAAGGTTGGTAAGGCTTGG
AAGCGCGGCTATCTTCTTTATGGTCCGCCAGGGACAGGAAAATCAACAATGATTGCAGCT
ATTGCAAACTTCTTGAATTATGATATTTATGATCTTGAGCTTACATCGGTTAAGGACAAC
TCGGGTCTAAAGAAGTTGCTTATGGAAACAACGAGCAAGTCTATTATTGTAATTGAAGAC
ATTGATTGCTCTATTGATCTCACTGGTAAGAGAAAGAAGAAAAAGAAGAAGAATGAGGAA
ACAACCAACGAAGATGAGGAAGAAGACTCGGAGTCGTCTAAAGAAAAAGTAAGTGAAAAT
AAGGAAACAGGCAAGCTTACACTTTCAGGACTGTTGAATTTTATTGATGGAATATGGTCA
GCTTGTGGTCAAGAGAGGATCATAATATTTACAACCAATCATAAGGATAAACTTGATCCA
GCTCTTATACGTCGAGGACGGATGGATATGCACATTGAGATGTCCTACTGCAAATATGAA
GCATTTAAAGTGTTGGCTAAGAATTACTTGGATATTGAAACACACCCTCTGTTCCAACAA
ATTCAAAGTTTATTCGAGGAAGTAAACATAAGTCCTTGTGATGTGGCTGAGAATTTAATG
CTGAAAAATGCTTCAGGAGGCCCTGAGATTTGCTTGAATAACTTAATTCAAGCTCTGGAA
AAGGCCAAGGAAAAGACTAACAAAGATAAAGAAGACGAGGAAAAAACCAGCTTGAATTCC
AAGAGCATCAAAAAGGTTTCCACAAAATTGGTTGGTCGTCTAAAAAAGTTGTGGAAATGA

Peptide Sequence

PEP ID

XP_016460218.1
PEP Infomation

PREDICTED: AAA-ATPase At3g28610-like [Nicotiana tabacum]
Sequence

MGAMSLTELGSKLAGLMFIWGTIQQFFPYTLRKRIKSFWQKFENYFYPYVQITIDEFSNG
KSNDIYTQVNSYLGTKSINKDAKYLKAEKSKNSKSFAVSLDEGEEIIDQFLGAKLSWRSH
IETFNENSSGRNNSRPIEKKSYTITFNKRYKEMVIEKYLKHVMEEGKAIEFKNRKQKIYT
NNCSEDWYWYGKGMWRDINFEHPATFDTLAMDPKKKEEIVSDLVAFSKGKDYYSKVGKAW
KRGYLLYGPPGTGKSTMIAAIANFLNYDIYDLELTSVKDNSGLKKLLMETTSKSIIVIED
IDCSIDLTGKRKKKKKKNEETTNEDEEEDSESSKEKVSENKETGKLTLSGLLNFIDGIWS
ACGQERIIIFTTNHKDKLDPALIRRGRMDMHIEMSYCKYEAFKVLAKNYLDIETHPLFQQ
IQSLFEEVNISPCDVAENLMLKNASGGPEICLNNLIQALEKAKEKTNKDKEDEEKTSLNS
KSIKKVSTKLVGRLKKLWK

Transcript Sequence

Gene sequence data has not been registered.